Git for bioinformaticians at the Bioinformatics FOAM meeting

Last week, I attended the annual Computational and Simulation Sciences and eResearch Conference, hosted by CSIRO in Melbourne. The meeting includes a workshop that we call Bioinformatics FOAM (Focus On Analytical Methods). This year it was run over 2.5 days (up from the previous 1.5 by popular request); one day for internal CSIRO stuff and the rest open to external participants.

I had the pleasure of giving a brief presentation on the use of Git in bioinformatics. Nothing startling; aimed squarely at bioinformaticians who may have heard of version control in general and Git in particular but who are yet to employ either. I’m excited because for once I am free to share, resulting in my first upload to Slideshare in almost 4.5 years. You can view it here, or at the Australian Bioinformatics Network Slideshare, or in the embed below.

See the slides…

Slideshare FAIL

I enjoy a good joke. I’m not so politically-correct that I won’t laugh at the expense of others – remember I grew up in the UK, where bullying was part of the culture ;-), nor so po-faced that I can’t laugh at my own expense.

I do not enjoy April Fools. Jokes on this day are rarely, if ever, good jokes. Perhaps they were more fun when humans lived in small, isolated communities with little knowledge of the outside world and so could be fooled en masse by spaghetti trees. However, this is the 21st century, the age of information. We should be harder to fool, because we know more about the world.

Paradoxically, it’s the information age that enables the flood of tedious, blatantly false, time-wasting stories in our inboxes and feed readers every April 1st. You might even say that everyday is April 1st, somewhere on the Web. The elements of surprise and ignorance are gone. Perhaps it’s time to abandon this quaint custom.

Which brings me to Slideshare, who decided that it would be tremendously funny to (1) inflate users’ slide views by adding two zeroes and (2) inform their users by email. Read the rest…